Bioorganic Chemistry

Serogroup

O59

Serotype

O59:H19

Strain

ECODAB#

103

Structure

Unknown

CarbBank

LinucsID

Non-sugar components

Comments

[1] contains genetic information but no structure.

Identical to

Cross-reacts with

¹H-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

¹³C-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

wzx (flippase)

TrEMBL entry

Q4KZ30

Sequence

MSNYIKNAGWIFFEKFVRIAISFMLFAFVSRVLNPNDFGVLSYYQTITTMLLALTNLGFD NVLINEFNQNEKHNKIFATAFWSRIIVSTVVILLFAVGVCFYDLPMVNKIVLLLCLSSLV FQTQNTYVSYFQSQLQASIITKISFLSLLLSALVKVYLLMTDKNIIWFAFSYSFDFAVSF LFFAVFSYKRNYVSISLRYFDLNVLKGLLRSSWPIIASAVIVVLYTRLDQLMIMNMLGSD SVAIFSVAIKISEAYLFVPAALVTSYYPLISKSPSNDNIRFYFDVVFATSIIMAVGVAII SFFLIPIMFGEYYACSYTILIVLLLGSLFSILGSACTNLMIVYGLSYLRLIRAIFGLLVN FSLNLIFIPKYGVIGAAYASVVSQIFAAWVSNAFSKKTIECFKLQTITVLTCGVLGGRQL CQILFKK

wzy (polymerase)

TrEMBL entry

Q4KZ36

Sequence

MKKSEFQAEKLIILFYFIINLCTFIIITSSSIYIGDPAGEYYTVPLDIAIILFISNTAIY YLLYLIYRCCVSHIAFHNEVIIKRIETLLFLGVTIALLGFFWIDYGRAEYQSTSPFGFVF RLIPYSVIWLLYVSINSKWNAKSIFLIVYYVAAKIIMGWSGILLALFWVLFIKYYSAKKR SFLFMCMCMTLLVILYFSAPIVYYLKYYIRYAGQFEFNYPVLLSKLTARLSTIQNVLYIY QNTNVFTNLYNKYLFDGFYFIEPITSILPRALLGISATNFETIYVNIVTGEFNPGVIFYL GLFGKLLAYFNTGIYNFGNFFIVTFVLLGGLFILLKLNFKKAANPFIFYTIIQFALSGSI EELSYTLYGICLVLIFCKIRFGIHNENRY

Comment

Data from [1]

GT name	Position in gene sequence	Linkage number	Donor	Acceptor	Similar to	BLAST	Comments
WclA	1	3	aDGal(1-> aDGalNAc(1-> aDGlcNAc(1->	->3)aDMan	O22 WbhP (ECODAB) O148 WbbG (ECODAB) O87 WfgO (ECODAB) O146 WbwU (ECODAB)	AAV74375	[1] Function is very uncertain.
WclB	2	2	aDMan(1->	->?)bDMan	O9 MtfB (ECODAB) O141 WfcC (ECODAB) O9 MtfA (ECODAB) O7:K1 WbbC (ECODAB) O8 Orf469 (ECODAB)	AAV74377	[1]
WclC	3	1	bDMan(1->	->3)aDGlcNAc	O6 Orf7 (ECODAB) O73 WbaD (ECODAB) O77 WbaD (ECODAB) O106 WbaD (ECODAB)	AAV74378	[1]

References

[1] FEMS Microbiol. Lett. 248 (2005) 153-161 [PubMed 15990253]

Edit this entry

Thu May 23 23:23:30 CEST 2013

Bioorganic Chemistry

The Widmalm Research Group