Bioorganic Chemistry

Serogroup

O86

Serotype

O86:B7

Strain

ECODAB#

128

Structure

->2)aDGal(1->3)bDGal(1->3)aDGalNAc(1->3)aDGalNAc(1->
                 |
        aLFuc(1->2)

CarbBank

LinucsID

Non-sugar components

Comments

Identical to

Cross-reacts with

¹H-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

¹³C-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

wzx (flippase)

TrEMBL entry

Q5JBG7

Sequence

MIKLLFSSSLLKMGVVLLNLLIPAIIIRFYSEYDFGIYSYLLTYAIVISVSQNGITASFRNLISNLEKND LLDYLLYSVRKITYPFLLIIFCLLLATLYVVGFDTLYGKICFFIAVSLINIYYPVVASYYDATGKTLNFV LLEIIFLLVFIAGVGILIYYKVSIYIVCILTANYRGVYAILLIMKKCVIFKQIRLKKKGGYKIFCSDDMI FIIIQLINVSNTLLFMNMFAKFYGVVAFGVFSVYYRFVAFPQQVISFSSSLIWINFRQVHVNNRVAAMQL LKRLFFIFTLLLIIWGGCVHFFIDKVVYLYSSKPLEYPGVLCFLNIMVCLMLLKDFSSIILNALTLYKEQ MIMNALLCLLNVIFFFFYNETNFDTIYLIFVSLLTLMFVFVNLSLIRSRL

wzy (polymerase)

TrEMBL entry

Q5JBG5

Sequence

MVKIKTPRLLCVIRKEKVGMVISRSNYRNICSYTFFMVNLFILILSVINEGFCEIAYVIISVSSVLFCVI IICLERQGGFLNPMTFCIISVFFFILIRPVFFSQNITENLNEVITAGLEIDEIYVFYSLAVVNISLAFTV LLYSVQKGTVSKLVGQLPDLFFYNKQLSMILLWGGGLFSAIFLIKSYKKFIILGQVSVFEADAYGLHDEL FWFTLSKYCYILSLLFSKNKNFILYSLLIFITSIGYILVGLRGYTIAYGFLLLFFLDIRYRLKIKWLLLV AILVTTISSLILNYRIGIEVNSGLLGIIFNPLLQQGASFETVYGALKYNEKILSCISYYDYFFTNKDIGS CIDIARGVYFKEGGSFASSFYSELIYFGWIIGSVALLLFAFSLAFVQSCYEKIIKNSMNNKLAYTYRLII FLALPNLIYFARSSLFDFITKVLFIALFIGGLSIVRHIALNIKKCH

Comment

Both wzx znd wzy From [1]

GT name	Position in gene sequence	Linkage number	Donor	Acceptor	Similar to	BLAST	Comments
WbwH	1	1	aDGalNAc(1->	->3)aDGalNAc	O127 WbiN (ECODAB) O86:K62:H2 WbnH (ECODAB) O86:K2:H2 WcmA (ECODAB) O87 WfgO (ECODAB) O22 WbhP (ECODAB) O128 WbsH (ECODAB)	AAO37709	[1]
WbwI	2	3/4	aDGal(1->	->3)bDGal	O86:K62:H2 WbnI (ECODAB) O86:K2:H2 WcmB (ECODAB)	AAO37716	[1]
WbwJ	3	2	bDGal(1->	->3)aDGalNAc	O86:K62:H2 WbnJ (ECODAB) O86:K2:H2 WcmC (ECODAB) O127 WbiP (ECODAB) O126 WbsT (ECODAB) O55:H7 WbgO (ECODAB) O167 WfdH (ECODAB) O128 WbsK (ECODAB)	AAO37718	[1]
WbwK	4	3/4	aLFuc(1->	->2)bDGal	O86:K62:H2 WbnK (ECODAB) O86:K2:H2 WcmD (ECODAB) O127 WbiQ (ECODAB) O55:H7 WbgN (ECODAB) O55:H6 WbgN (ECODAB) O126 WbgL (ECODAB)	AAO37719	[1]

References

[1] Appl. Environ. Microbiol. (2005): 7995-8001 [PubMed 16332778]

[2] Biochemistry. (2008) 11590-11597: [PubMed 18842005]

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Sat May 18 11:37:08 CEST 2013

Bioorganic Chemistry

The Widmalm Research Group