Bioorganic Chemistry

Serogroup

O174

Serotype

Strain

ECODAB#

132

Structure

Unknown

CarbBank

LinucsID

Non-sugar components

Comments

Identical to

Cross-reacts with

O21 [1]

¹H-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

¹³C-NMR

Conditions

Solvent: not stated; Temp.:

Reference

not stated=ppm

Comment

wzx (flippase)

TrEMBL entry

Q3IA93

Sequence

MKYLFIWSLTPKLYELSLNLSIGIALINYLGPVEQGKIGFLINLCTLMSFLTTLGIGPVYSNFVSRSNNE RLISNKFKENVTLRFLGYILFLLVSLLFLFFFKRGLIYLSIPFLIGKLFFSFDIYYNLIEGKAGFKNYAI SKFISLTCINVFRLYCIYAQLDIYWVAFSFFLTDFLTFFVYFLLFDKFKYFGFKFDYKKSLIIFKINYKL ALSTIVVSLFTQLDIVMIGTMLGDKAAGEYYASTRLATPLVFISTIIISTFFSKLSRNWVVNKKEYYELL AFISGSIIFSYSAIVLIIFIFGNDIFFLFFSSEYKASYDLFLIHIVGLIFVLLGPLTGKHLIIKKDYGAE LSKTLLAAIVNIALTSIAVLKYENLNLVAVSTLISYMIANFGYFIVKKDWLLIKAILNGVNPLFLVRYAK KIL

wzy (polymerase)

TrEMBL entry

Q3IA92

Sequence

MLKRYSNLIFSFVIAFSFFSYVMNPSLKFIYKSPVINFIPFLLCCLITIIFLTEKKIKLNYYELFSILYV GFFFILQYTYFIQSTDSIETLLRLMSVNFSFLFGLLLGWCFKRESIEKLFILWVLLLSIANICGVINYSD GVEFNHLNFTLPLGTVVTWLIFKAFMKDTDRYIFTLSVILFLFFNIIFAGSRTAIFLPILVSLFIMVIFR KYVSIKKTVISFIILITITIISLPYILSNLNAYFLSKVQNMADISEDSRYNLYLKCFNMLLEHPLGIGYG NYKYFITEPYPHNILLEIGLNSGVLGCFVFITYVMITTIVIIKKTKSCYNEKNLFVLTIFLYSLFSWMFS NDFASSSVVFFLLGVLGHIASSNNEKEIK

Comment

From [2]

GT name	Position in gene sequence	Linkage number	Donor	Acceptor	Similar to	BLAST	Comments
WbcX	1		bDGalNAc(1->	->3)aLRha	WcaN Putative glucuronosyltransferase O117 WbeA (ECODAB) O107 WclW (ECODAB)	AAY28247	[2] WcaN studied in [3]
WbcY	2	2	bDGlcA(1-> bDGalNAc(1-> bDGlcNAc(1-> bDGlc(1-> bDGal(1->	->?)bDGal ->?)bDGlcNAc	WcaN Putative glucuronosyltransferase O27 WejW O9a:K30:H12 WcaN O128 WbsK (ECODAB) O66 WfaC (ECODAB) O32 WfeA (ECODAB) O113 WbnA (ECODAB) O127 WbiP (ECODAB) O167 WfdH (ECODAB) O55:H7 WbgO (ECODAB)	AAY28250	[2] WcaN studied in [3]
WbcZ	3	1	bDGal(1->	->?)?DGalNAc ->?)?DGlcNAc	O146 WbwW (ECODAB) O155 WclG (ECODAB) O104 WbwC (ECODAB) O112ac WfeJ (ECODAB) O71 WdaK O117 WbeD (ECODAB) O107 WclZ (ECODAB) O147 WfbZ (ECODAB) O63:H6 WbuP (ECODAB)	AAY28251	[2]

References

[1] APMIS 112 (2004), 569–84 [PubMed 15601305]

[2] J. Clin. Microbiol.(2005), 5143-5149 [PubMed 16207976]

[3] Mol. Microbiol. (1999), 1321-32 [PubMed 10200954]

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Thu May 23 16:03:29 CEST 2013

Bioorganic Chemistry

The Widmalm Research Group