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SerogroupO104 
SerotypeO104:K-:H-12 
Strain 
ECODAB#30
Structure
->4)aDGal(1->4)aNeu5,7,9Ac3(2->3)bDGal(1->3)bDGalNAc(1-> 
CarbBank
24642
LinucsID 8969
Non-sugar componentsacetyl groups 
CommentsStructure [1] 
Identical toE. coli K9 has the same structure but with only two acetyl groups on Neu [2]. 
Cross-reacts with 
1H-NMR
 

    
ConditionsSolvent: not stated; Temp.: 

    
Referencenot stated=ppm

    
Comment

    

    
13C-NMR
 

    
ConditionsSolvent: not stated; Temp.: 

    
Referencenot stated=ppm

    
Comment

    

    
wzx (flippase)

    
TrEMBL entry 
						    Q93NP6
    

    
Sequence
MGDIILMNMLKYIQPILSLLLRMVTVISSFLFSWIVARLFGAESAGTIFFYITIITIFVT
IASQGAELGIAKAVARLAGNEKKQIGVLRSVVLRTNKMFLILSPAFLFYLLYEGYEINNL
IILFVLMLILGYCFLYMNILSFFYQGIGNITMMILSQRAIFNLFSFLLIAFLWGVFYLEN
KKLSFMTLEQQFVIITIAGLISFGLLYLYHRLTSNYSPLYYKPEGFDKSCKELFKIQLLQ
IITMYGSQIIINIFSVKADIAGFIVAQRISTLLGFFVLAISGVISSQVSRAYSLKDFTSI
HKSAYHSVLFSSFLGVPVAGILILYSKECLLLFGNDFYQYQAVLIVLIVSQVFNCLTGAC
DIILMFIDGEKEHKKNVLTGTFLAIVLSFILIPIYSALGAAIATAFSAIIVNILDVISIK
KKAGFWIFKTV



    

    
wzy (polymerase)

    
TrEMBL entry 
						   Q93NP8
    

    
Sequence
MTSYFIYNFYVLFAIIFAYVHERINLFTSRGVKFLSIGCVFCSLFLLSALRFDVGPDYET
YVYIYKNIVAGRIDITYDKYFFGYLSTLFSSLDRGYVLVFAVYSFLTLFFVFKVILERKI
FLWGIIVFCFVGFYLDSLDRIRQVLAVAIFLYSIKFIEKKEPLRYFIAIIIASFFHLSAL
MLMPVYFYNRFKFEPLTLIIGLFGLLVLYLSGFTTEIQALIYNNIPYYNEIYGNSQFAHL
QGGFGTGLGFVFHIFLIMFSIYNLKDNYILRNLLFTAGLLMIIAPGNLNIMRFGQYFYIS
LIIALPLAIKSLKKEYSYNLLLKCLFFCLLFIFFQSQQSRNNYSYQSIFSDSFNSELFTP
RSSDRTIINH



    

    
CommentData from O104:H12 strain H519, IMVS, Adelaide, Australia [3]
    

    

    

	

	  

	    GT name
	    Position in

	      gene sequence		
	    Linkage number
	    Donor
	    Acceptor
	    Similar to
	    BLAST
	    Comments
	  

	  

	     WbwA
	    1
	    2
	    aNeu5Ac(2->

	    ->3)bDGal

	     O56 WfaR (ECODAB)

O24 WfaN (ECODAB)


	    AAK64371
	    [3]
	  

	  

	    WbwB
	    2
	    3
	    aDGal(1->


	    ->4)aNeu

	    O112ab WfeG (ECODAB)

O167 WfdI (ECODAB)

O56 WfaQ (ECODAB)


	    AAK64373
	    [3]
	  

	  

	    WbwC
	    3
	    1
	    bDGal(1->

	    ->3)bDGalNAc

	    O155 WclG (ECODAB)

O174 WbcZ (ECODAB)

O146 WbwW (ECODAB)

O117 WbeD (ECODAB)

O107 WclZ (ECODAB)

 O112ac WfeJ (ECODAB)

 O7 WbbD (ECODAB)

 O147 WfbZ (ECODAB)


	    14517810
	    [3]
	  

	  

	    
	    
	    
	    
	    
	    
	    
	    
	  

	  

	    
	    
	    
	    
	    
	    
	    
	    
	  

	  

	    
	    
	    
	    
	    
	    
	    
	    
	  

	  

	    
	    
	    
	    
	    
	    
	    
	    
	  

	

    

    

    

    
References
      
[1] Carbohydr. Res. 236 (1992) 195-208  [PubMed 1291048].
 



[2] Carbohydr. Res. 170 (1987) 193-206  [PubMed 3325166].
 



[3] Gene 270 (2001) 231-236  [PubMed 11404020] 


  

  
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Sun May 19 21:43:12 CEST 2013